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Public Health Genomics and Precision Health Knowledge Base (v9.0)
PHGKB
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Public Health Genomics Branch
PHGKB Weekly Horizon Scan
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Precision Health Database|Search|Public Health Genomics and Precision Health Knowledge Base (PHGKB)
Last data update: May 03, 2024
. (Total: 63769 Documents since 2012)
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Harnessing genomics for antimicrobial resistance surveillance
The Lancet Series, November 2023
Global trends in the increasing prevalence of the fosfomycin resistance genenin Staphylococcus aureus
DFM Monte et al, Lancet Microbe, November 2023
Genomic surveillance for antimicrobial resistance - a One Health perspective.
Steven P Djordjevic et al. Nat Rev Genet 2023
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How to fight antibiotic resistance.
Mike May et al. Nat Med 2023 29(7) 1583-1586
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Impact of antibiotics on gut microbiome composition and resistome in the first years of life in low- to middle-income countries: A systematic review.
Charlie C Luchen et al. PLoS Med 2023 20(6) e1004235
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The evolution and international spread of extensively drug resistant Shigella sonnei.
Lewis C E Mason et al. Nature communications 2023 14(1) 1983
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An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance
NL Sherry et al, Nature Comm, January 4, 2023
Metagenomic prediction of antimicrobial resistance in critically ill patients with lower respiratory tract infections
PH Serpa et al, Genome Medicine, July 12, 2022
Tracing the origins of antibiotic resistance
CMJE vandenbrook et al, Nature Medicine, March 22, 2022
Exploiting genomics to mitigate the public health impact of antimicrobial resistance
C Waddington et al, Genome Medicine, February 16, 2022
Whole genome sequencing-based classification of human-related Haemophilus species and detection of antimicrobial resistance genes
M Diricks et al, Genome Medicine, February 9, 2022
Innovative tools take aim at antibiotic-resistant microbes
J Madhusoodanan, Nature, August 23, 2021
Assessing a novel, lab-free, point-of-care test for SARS-CoV-2 (CovidNudge): a diagnostic accuracy study.
Gibani Malick M et al. The Lancet. Microbe 2020 Sep
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Emerging Drug-Resistant Meningitis Detected in the US
BM Kuehn, JAMA, August 11, 2020
Uncovering hidden antimicrobial resistance patterns within the hospital microbiome
BW Haak et al, Nature Medicine, June 8, 2020
Powerful antibiotics discovered using AI- Machine learning spots molecules that work even against ‘untreatable’ strains of bacteria.
J Marchant, Nature, February 20, 2020
Notes from the Field: Carbapenem-resistant Klebsiella pneumoniae with mcr-1 Gene Identified in a Hospitalized Patient — Wyoming, January 2019
H Rhoades et al, MMWR, February 14, 2020
One year cross-sectional study in adult and neonatal intensive care units reveals the bacterial and antimicrobial resistance genes profiles in patients and hospital surfaces
AP Christoff et al, MedRXIV, February 13, 2020
Innovative and rapid antimicrobial susceptibility testing systems
AV Belkum et al, Nature Rev Microbiology, February 2020
U.S. continues to lead the fight against antibiotic resistance
A Azar et al, Stat News, December 4, 2019
Biggest Threats and Data- 2019 AR Threats Report
CDC, November 2019
Machine learning based prediction of antibiotic sensitivity in patients with critical illness
D Ghosh et al, MedRXIV, September 20, 2019
Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth.
Shao Yan, et al. Nature 2019 0 0. (7776) 117-121
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Genomic epidemiology of syphilis reveals independent emergence of macrolide resistance across multiple circulating lineages.
Beale Mathew A, et al. Nature communications 2019 7 0. (1) 3255
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Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs.
Phelan Jody E et al. Genome medicine 2019 Jun 11(1) 41
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Machine Learning "Very Easy to Abuse"
C Arnold, the Scientist, June 24, 2019
Clinical metagenomics.
Chiu Charles Y, et al. Nature reviews. Genetics 2019 3 0.
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Sequencing-based methods and resources to study antimicrobial resistance.
Boolchandani Manish, et al. Nature reviews. Genetics 2019 3 0.
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Wellcome Sanger Institute at 25: how the genomic revolution is changing medicine
Wellcome Sanger, September 2018
What is Whole Genome Sequencing?
K Grant, Public Health Matters Blog, May 2018
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Page last reviewed:
Feb 1, 2024
Page last updated:
May 03, 2024
Content source:
Public Health Genomics Branch in the Division of Blood Disorders and Public Health Genomics
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National Center on Birth Defects and Developmental Disabilities
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